PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011682-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 430aa    MW: 46634.6 Da    PI: 8.1609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011682-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.28e-053203581255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  NNU_011682-RA 320 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 358
                    7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.725308357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.40E-5318362No hitNo description
SuperFamilySSF474595.89E-11318370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-9322365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MESANLHHQH HQLQEQLVAG SPSLATPSFY GVGSNSHAWN SNLLNDGSFN QNIGGVLANS  60
RDLRQNSDTL ISSSVNNSMF QDLGFHWDSN ASGSFTNHSS HQPHLAKIKE LSDSFPKLSQ  120
TVSNVEEFHL PSTSYVKNEQ QSCHNPTDKM LLKTLASGCQ NNTLQHSAGE SYADAQSCAS  180
TSSFGGLPPP SSGGRNFSQI FPSINISNMY SSSLPFSSSL GVNLQALDFL SSTKFGGSLT  240
QQPSPSHLGM LRDSLSFGVD QLQQSSLIRS FNSPNKVSSF TNRVTETKKP SNSSEPKVSQ  300
AATKKPRFES RSSFPPFKVR KEKLGDRIAA LQQLVSPFGK TDTASVLMEA IGYIKFLQDQ  360
VETLSVPYMK SSRNKICRTM EGGSGDGDRN DEQKQDLRSR GLCLVPLSCT SYFTNDAGGV  420
WPPPNFGGGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263576.10.0PREDICTED: transcription factor bHLH110-like isoform X1
TrEMBLA5C1E11e-163A5C1E1_VITVI; Putative uncharacterized protein
TrEMBLE0CQH41e-164E0CQH4_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g12970.t011e-163(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-66bHLH family protein